tlayout.c

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/*************************************************************************
 * Copyright (c) 2011 AT&T Intellectual Property
 * All rights reserved. This program and the accompanying materials
 * are made available under the terms of the Eclipse Public License v1.0
 * which accompanies this distribution, and is available at
 * https://www.eclipse.org/legal/epl-v10.html
 *
 * Contributors: Details at https://graphviz.org
 *************************************************************************/
 
/* tlayout.c:
 * Written by Emden R. Gansner
 *
 * Module for initial layout, using point nodes and ports.
 *
 * Note: If interior nodes are not connected, they tend to fly apart,
 * despite being tied to port nodes. This occurs because, as initially
 * coded, as the nodes tend to straighten into a line, the radius
 * grows causing more expansion. Is the problem really here and not
 * with disconnected nodes in xlayout? If here, we can either forbid
 * expansion or eliminate repulsion between nodes only connected
 * via port nodes.
 */
 
#include "config.h"
 
/* uses PRIVATE interface */
#define FDP_PRIVATE 1
 
#include <sys/types.h>
#include <math.h>
#include <stdlib.h>
#include <time.h>
#ifndef _WIN32
#include <unistd.h>
#endif
#include <ctype.h>
#include <fdpgen/dbg.h>
#include <fdpgen/grid.h>
#include <neatogen/neato.h>
 
#ifndef HAVE_SRAND48
#define srand48 srand
#endif
 
#include <fdpgen/tlayout.h>
#include <common/globals.h>
 
#define D_useGrid   (fdp_parms->useGrid)
#define D_useNew    (fdp_parms->useNew)
#define D_numIters  (fdp_parms->numIters)
#define D_unscaled  (fdp_parms->unscaled)
#define D_C         (fdp_parms->C)
#define D_Tfact     (fdp_parms->Tfact)
#define D_K         (fdp_parms->K)
#define D_T0        (fdp_parms->T0)
 
  /* Actual parameters used; initialized using fdp_parms, then possibly
   * updated with graph-specific values.
   */
typedef struct {
    int useGrid;        /* use grid for speed up */
    int useNew;         /* encode x-K into attractive force */
    long seed;          /* seed for position RNG */
    int numIters;       /* actual iterations in layout */
    int maxIters;       /* max iterations in layout */
    int unscaled;       /* % of iterations used in pass 1 */
    double C;           /* Repulsion factor in xLayout */
    double Tfact;       /* scale temp from default expression */
    double K;           /* spring constant; ideal distance */
    double T0;          /* initial temperature */
    int smode;          /* seed mode */
    double Cell;        /* grid cell size */
    double Wd;          /* half-width of boundary */
    double Ht;          /* half-height of boundary */
    int pass1;          /* iterations used in pass 1 */
    int loopcnt;        /* actual iterations in this pass */
} parms_t;
 
static parms_t parms;
 
#define T_useGrid   (parms.useGrid)
#define T_useNew    (parms.useNew)
#define T_seed      (parms.seed)
#define T_numIters  (parms.numIters)
#define T_maxIters  (parms.maxIters)
#define T_unscaled  (parms.unscaled)
#define T_C         (parms.C)
#define T_Tfact     (parms.Tfact)
#define T_K         (parms.K)
#define T_T0        (parms.T0)
#define T_smode     (parms.smode)
#define T_Cell      (parms.Cell)
#define T_Wd        (parms.Wd)
#define T_Ht        (parms.Ht)
#define T_pass1     (parms.pass1)
#define T_loopcnt   (parms.loopcnt)
 
#define EXPFACTOR  1.2
#define DFLT_maxIters 600
#define DFLT_K  0.3
#define DFLT_Cell  0.0
#define DFLT_seed  1
#define DFLT_smode INIT_RANDOM
 
static double cool(int t)
{
    return T_T0 * (T_maxIters - t) / T_maxIters;
}
 
/* reset_params:
 */
static void reset_params(void)
{
    T_T0 = -1.0;
}
 
/* init_params:
 * Set parameters for expansion phase based on initial
 * layout parameters. If T0 is not set, we set it here
 * based on the size of the graph. In this case, we
 * return 1, so that fdp_tLayout can unset T0, to be
 * reset by a recursive call to fdp_tLayout.
 */
static int init_params(graph_t * g, xparams * xpms)
{
    int ret = 0;
 
    if (T_T0 == -1.0) {
        int nnodes = agnnodes(g);
 
        T_T0 = T_Tfact * T_K * sqrt(nnodes) / 5;
#ifdef DEBUG
        if (Verbose) {
            prIndent();
            fprintf(stderr, "tlayout %s", agnameof(g));
            fprintf(stderr, "(%s) : T0 %f\n", agnameof(GORIG(g->root)), T_T0);
        }
#endif
        ret = 1;
    }
 
    xpms->T0 = cool(T_pass1);
    xpms->K = T_K;
    xpms->C = T_C;
    xpms->numIters = T_maxIters - T_pass1;
 
    if (T_numIters >= 0) {
        if (T_numIters <= T_pass1) {
            T_loopcnt = T_numIters;
            xpms->loopcnt = 0;
        } else if (T_numIters <= T_maxIters) {
            T_loopcnt = T_pass1;
            xpms->loopcnt = T_numIters - T_pass1;
        }
    } else {
        T_loopcnt = T_pass1;
        xpms->loopcnt = xpms->numIters;
    }
    return ret;
}
 
/* fdp_initParams:
 * Initialize parameters based on root graph attributes.
 */
void fdp_initParams(graph_t * g)
{
    T_useGrid = D_useGrid;
    T_useNew = D_useNew;
    T_numIters = D_numIters;
    T_unscaled = D_unscaled;
    T_Cell = DFLT_Cell;
    T_C = D_C;
    T_Tfact = D_Tfact;
    T_maxIters = late_int(g, agattr(g,AGRAPH, "maxiter", NULL), DFLT_maxIters, 0);
    D_K = T_K = late_double(g, agattr(g,AGRAPH, "K", NULL), DFLT_K, 0.0);
    if (D_T0 == -1.0) {
        T_T0 = late_double(g, agattr(g,AGRAPH, "T0", NULL), -1.0, 0.0);
    } else
        T_T0 = D_T0;
    T_seed = DFLT_seed;
    T_smode = setSeed (g, DFLT_smode, &T_seed);
    if (T_smode == INIT_SELF) {
        agwarningf("fdp does not support start=self - ignoring\n");
        T_seed = DFLT_smode;
    }
 
    T_pass1 = T_unscaled * T_maxIters / 100;
 
    if (T_useGrid) {
        if (T_Cell <= 0.0)
            T_Cell = 3 * T_K;
    }
#ifdef DEBUG
    if (Verbose) {
        prIndent();
        fprintf(stderr,
                "Params %s : K %f T0 %f Tfact %f maxIters %d unscaled %d\n",
                agnameof(g),
                T_K, T_T0, T_Tfact, T_maxIters, T_unscaled);
    }
#endif
}
 
static void
doRep(node_t * p, node_t * q, double xdelta, double ydelta, double dist2)
{
    double force;
    double dist;
 
    while (dist2 == 0.0) {
        xdelta = 5 - rand() % 10;
        ydelta = 5 - rand() % 10;
        dist2 = xdelta * xdelta + ydelta * ydelta;
    }
    if (T_useNew) {
        dist = sqrt(dist2);
        force = T_K * T_K / (dist * dist2);
    } else
        force = T_K * T_K / dist2;
    if (IS_PORT(p) && IS_PORT(q))
        force *= 10.0;
    DISP(q)[0] += xdelta * force;
    DISP(q)[1] += ydelta * force;
    DISP(p)[0] -= xdelta * force;
    DISP(p)[1] -= ydelta * force;
}
 
/* applyRep:
 * Repulsive force = (K*K)/d
 *  or K*K/d*d
 */
static void applyRep(Agnode_t * p, Agnode_t * q)
{
    double xdelta, ydelta;
 
    xdelta = ND_pos(q)[0] - ND_pos(p)[0];
    ydelta = ND_pos(q)[1] - ND_pos(p)[1];
    doRep(p, q, xdelta, ydelta, xdelta * xdelta + ydelta * ydelta);
}
 
static void doNeighbor(Grid * grid, int i, int j, node_list * nodes)
{
    cell *cellp = findGrid(grid, i, j);
    node_list *qs;
    Agnode_t *p;
    Agnode_t *q;
    double xdelta, ydelta;
    double dist2;
 
    if (cellp) {
#ifdef DEBUG
        if (Verbose >= 3) {
            prIndent();
            fprintf(stderr, "  doNeighbor (%d,%d) : %d\n", i, j,
                    gLength(cellp));
        }
#endif
        for (; nodes != 0; nodes = nodes->next) {
            p = nodes->node;
            for (qs = cellp->nodes; qs != 0; qs = qs->next) {
                q = qs->node;
                xdelta = (ND_pos(q))[0] - (ND_pos(p))[0];
                ydelta = (ND_pos(q))[1] - (ND_pos(p))[1];
                dist2 = xdelta * xdelta + ydelta * ydelta;
                if (dist2 < T_Cell * T_Cell)
                    doRep(p, q, xdelta, ydelta, dist2);
            }
        }
    }
}
 
static int gridRepulse(cell *cellp, Grid *grid) {
    node_list *nodes = cellp->nodes;
    int i = cellp->p.i;
    int j = cellp->p.j;
    node_list *p;
    node_list *q;
 
#ifdef DEBUG
    if (Verbose >= 3) {
        prIndent();
        fprintf(stderr, "gridRepulse (%d,%d) : %d\n", i, j,
                gLength(cellp));
    }
#endif
    for (p = nodes; p != 0; p = p->next) {
        for (q = nodes; q != 0; q = q->next)
            if (p != q)
                applyRep(p->node, q->node);
    }
 
    doNeighbor(grid, i - 1, j - 1, nodes);
    doNeighbor(grid, i - 1, j, nodes);
    doNeighbor(grid, i - 1, j + 1, nodes);
    doNeighbor(grid, i, j - 1, nodes);
    doNeighbor(grid, i, j + 1, nodes);
    doNeighbor(grid, i + 1, j - 1, nodes);
    doNeighbor(grid, i + 1, j, nodes);
    doNeighbor(grid, i + 1, j + 1, nodes);
 
    return 0;
}
 
/* applyAttr:
 * Attractive force = weight*(d*d)/K
 *  or        force = (d - L(e))*weight(e)
 */
static void applyAttr(Agnode_t * p, Agnode_t * q, Agedge_t * e)
{
    double xdelta, ydelta;
    double force;
    double dist;
    double dist2;
 
    xdelta = ND_pos(q)[0] - ND_pos(p)[0];
    ydelta = ND_pos(q)[1] - ND_pos(p)[1];
    dist2 = xdelta * xdelta + ydelta * ydelta;
    while (dist2 == 0.0) {
        xdelta = 5 - rand() % 10;
        ydelta = 5 - rand() % 10;
        dist2 = xdelta * xdelta + ydelta * ydelta;
    }
    dist = sqrt(dist2);
    if (T_useNew)
        force = ED_factor(e) * (dist - ED_dist(e)) / dist;
    else
        force = ED_factor(e) * dist / ED_dist(e);
    DISP(q)[0] -= xdelta * force;
    DISP(q)[1] -= ydelta * force;
    DISP(p)[0] += xdelta * force;
    DISP(p)[1] += ydelta * force;
}
 
static void updatePos(Agraph_t * g, double temp, bport_t * pp)
{
    Agnode_t *n;
    double temp2;
    double len2;
    double x, y, d;
    double dx, dy;
 
    temp2 = temp * temp;
    for (n = agfstnode(g); n; n = agnxtnode(g, n)) {
        if (ND_pinned(n) & P_FIX)
            continue;
        dx = DISP(n)[0];
        dy = DISP(n)[1];
        len2 = dx * dx + dy * dy;
 
        /* limit by temperature */
        if (len2 < temp2) {
            x = ND_pos(n)[0] + dx;
            y = ND_pos(n)[1] + dy;
        } else {
            double fact = temp / sqrt(len2);
            x = ND_pos(n)[0] + dx * fact;
            y = ND_pos(n)[1] + dy * fact;
        }
 
        /* if ports, limit by boundary */
        if (pp) {
            d = sqrt(x * x / (T_Wd * T_Wd) + y * y / (T_Ht * T_Ht));
            if (IS_PORT(n)) {
                ND_pos(n)[0] = x / d;
                ND_pos(n)[1] = y / d;
            } else if (d >= 1.0) {
                ND_pos(n)[0] = 0.95 * x / d;
                ND_pos(n)[1] = 0.95 * y / d;
            } else {
                ND_pos(n)[0] = x;
                ND_pos(n)[1] = y;
            }
        } else {
            ND_pos(n)[0] = x;
            ND_pos(n)[1] = y;
        }
    }
}
 
#define FLOOR(d) ((int)floor(d))
 
/* gAdjust:
 */
static void gAdjust(Agraph_t * g, double temp, bport_t * pp, Grid * grid)
{
    Agnode_t *n;
    Agedge_t *e;
 
    if (temp <= 0.0)
        return;
 
    clearGrid(grid);
 
    for (n = agfstnode(g); n; n = agnxtnode(g, n)) {
        DISP(n)[0] = DISP(n)[1] = 0;
        addGrid(grid, FLOOR((ND_pos(n))[0] / T_Cell), FLOOR((ND_pos(n))[1] / T_Cell),
                n);
    }
 
    for (n = agfstnode(g); n; n = agnxtnode(g, n)) {
        for (e = agfstout(g, n); e; e = agnxtout(g, e))
            if (n != aghead(e))
                applyAttr(n, aghead(e), e);
    }
    walkGrid(grid, gridRepulse);
 
 
    updatePos(g, temp, pp);
}
 
/* adjust:
 */
static void adjust(Agraph_t * g, double temp, bport_t * pp)
{
    Agnode_t *n;
    Agnode_t *n1;
    Agedge_t *e;
 
    if (temp <= 0.0)
        return;
 
    for (n = agfstnode(g); n; n = agnxtnode(g, n)) {
        DISP(n)[0] = DISP(n)[1] = 0;
    }
 
    for (n = agfstnode(g); n; n = agnxtnode(g, n)) {
        for (n1 = agnxtnode(g, n); n1; n1 = agnxtnode(g, n1)) {
            applyRep(n, n1);
        }
        for (e = agfstout(g, n); e; e = agnxtout(g, e)) {
            if (n != aghead(e))
                applyAttr(n, aghead(e), e);
        }
    }
 
    updatePos(g, temp, pp);
}
 
/* initPositions:
 * Create initial layout of nodes
 * TODO :
 *  Position nodes near neighbors with positions.
 *  Use bbox to reset K.
 */
static pointf initPositions(graph_t * g, bport_t * pp)
{
    int nG = agnnodes(g) - NPORTS(g);
    double size;
    Agnode_t *np;
    int n_pos = 0;              /* no. of nodes with position info */
    boxf bb = { {0, 0}, {0, 0} };
    pointf ctr;                 /* center of boundary ellipse */
    long local_seed;
    double PItimes2 = M_PI * 2.0;
 
    for (np = agfstnode(g); np; np = agnxtnode(g, np)) {
        if (ND_pinned(np)) {
            if (n_pos) {
                bb.LL.x = MIN(ND_pos(np)[0], bb.LL.x);
                bb.LL.y = MIN(ND_pos(np)[1], bb.LL.y);
                bb.UR.x = MAX(ND_pos(np)[0], bb.UR.x);
                bb.UR.y = MAX(ND_pos(np)[1], bb.UR.y);
            } else {
                bb.UR.x = bb.LL.x = ND_pos(np)[0];
                bb.UR.y = bb.LL.y = ND_pos(np)[1];
            }
            n_pos++;
        }
    }
 
    size = T_K * (sqrt((double) nG) + 1.0);
    T_Wd = T_Ht = EXPFACTOR * (size / 2.0);
    if (n_pos == 1) {
        ctr.x = bb.LL.x;
        ctr.y = bb.LL.y;
    } else if (n_pos > 1) {
        double alpha, area, width, height, quot;
        ctr.x = (bb.LL.x + bb.UR.x) / 2.0;
        ctr.y = (bb.LL.y + bb.UR.y) / 2.0;
        width = EXPFACTOR * (bb.UR.x - bb.LL.x);
        height = EXPFACTOR * (bb.UR.y - bb.LL.y);
        area = 4.0 * T_Wd * T_Ht;
        quot = width * height / area;
        if (quot >= 1.0) {      /* If bbox has large enough area, use it */
            T_Wd = width / 2.0;
            T_Ht = height / 2.0;
        } else if (quot > 0.0) {        /* else scale up to have enough area */
            quot = 2.0 * sqrt(quot);
            T_Wd = width / quot;
            T_Ht = height / quot;
        } else {                /* either width or height is 0 */
            if (width > 0) {
                height = area / width;
                T_Wd = width / 2.0;
                T_Ht = height / 2.0;
            } else if (height > 0) {
                width = area / height;
                T_Wd = width / 2.0;
                T_Ht = height / 2.0;
            }
            /* If width = height = 0, use Wd and Ht as defined above for
             * the case the n_pos == 0.
             */
        }
 
        /* Construct enclosing ellipse */
        alpha = atan2(T_Ht, T_Wd);
        T_Wd = T_Wd / cos(alpha);
        T_Ht = T_Ht / sin(alpha);
    } else {
        ctr.x = ctr.y = 0;
    }
 
    /* Set seed value */
    if (T_smode == INIT_RANDOM)
        local_seed = T_seed;
    else {
#if defined(_WIN32)
        local_seed = (long)time(NULL);
#else
        local_seed = getpid() ^ time(NULL);
#endif
    }
    srand48(local_seed);
 
    /* If ports, place ports on and nodes within an ellipse centered at origin
     * with halfwidth Wd and halfheight Ht.
     * If no ports, place nodes within a rectangle centered at origin
     * with halfwidth Wd and halfheight Ht. Nodes with a given position
     * are translated. Wd and Ht are set to contain all positioned points.
     * The reverse translation will be applied to all
     * nodes at the end of the layout.
     * TODO: place unfixed points using adjacent ports or fixed pts.
     */
    if (pp) {
        while (pp->e) {         /* position ports on ellipse */
            np = pp->n;
            ND_pos(np)[0] = T_Wd * cos(pp->alpha) + ctr.x;
            ND_pos(np)[1] = T_Ht * sin(pp->alpha) + ctr.y;
            ND_pinned(np) = P_SET;
            pp++;
        }
        for (np = agfstnode(g); np; np = agnxtnode(g, np)) {
            if (IS_PORT(np))
                continue;
            if (ND_pinned(np)) {
                ND_pos(np)[0] -= ctr.x;
                ND_pos(np)[1] -= ctr.y;
            } else {
                pointf p = { 0.0, 0.0 };
                int cnt = 0;
                node_t *op;
                edge_t *ep;
                for (ep = agfstedge(g, np); ep; ep = agnxtedge(g, ep, np)) {
                    if (aghead(ep) == agtail(ep))
                        continue;
                    op = aghead(ep) == np ? agtail(ep) : aghead(ep);
                    if (!hasPos(op))
                        continue;
                    if (cnt) {
                        p.x = (p.x * cnt + ND_pos(op)[0]) / (cnt + 1);
                        p.y = (p.y * cnt + ND_pos(op)[1]) / (cnt + 1);
                    } else {
                        p.x = ND_pos(op)[0];
                        p.y = ND_pos(op)[1];
                    }
                    cnt++;
                }
                if (cnt > 1) {
                    ND_pos(np)[0] = p.x;
                    ND_pos(np)[1] = p.y;
                } else if (cnt == 1) {
                    ND_pos(np)[0] = 0.98 * p.x + 0.1 * ctr.x;
                    ND_pos(np)[1] = 0.9 * p.y + 0.1 * ctr.y;
                } else {
                    double angle = PItimes2 * drand48();
                    double radius = 0.9 * drand48();
                    ND_pos(np)[0] = radius * T_Wd * cos(angle);
                    ND_pos(np)[1] = radius * T_Ht * sin(angle);
                }
                ND_pinned(np) = P_SET;
            }
        }
    } else {
        if (n_pos) {            /* If positioned nodes */
            for (np = agfstnode(g); np; np = agnxtnode(g, np)) {
                if (ND_pinned(np)) {
                    ND_pos(np)[0] -= ctr.x;
                    ND_pos(np)[1] -= ctr.y;
                } else {
                    ND_pos(np)[0] = T_Wd * (2.0 * drand48() - 1.0);
                    ND_pos(np)[1] = T_Ht * (2.0 * drand48() - 1.0);
                }
            }
        } else {                /* No ports or positions; place randomly */
            for (np = agfstnode(g); np; np = agnxtnode(g, np)) {
                ND_pos(np)[0] = T_Wd * (2.0 * drand48() - 1.0);
                ND_pos(np)[1] = T_Ht * (2.0 * drand48() - 1.0);
            }
        }
    }
 
    return ctr;
}
 
/* fdp_tLayout:
 * Given graph g with ports nodes, layout g respecting ports.
 * If some node have position information, it may be useful to
 * reset temperature and other parameters to reflect this.
 */
void fdp_tLayout(graph_t * g, xparams * xpms)
{
    int i;
    int reset;
    bport_t *pp = PORTS(g);
    double temp;
    Grid *grid;
    pointf ctr;
    Agnode_t *n;
 
    reset = init_params(g, xpms);
    temp = T_T0;
 
    ctr = initPositions(g, pp);
 
    if (T_useGrid) {
        grid = mkGrid(agnnodes(g));
        adjustGrid(grid, agnnodes(g));
        for (i = 0; i < T_loopcnt; i++) {
            temp = cool(i);
            gAdjust(g, temp, pp, grid);
        }
        delGrid(grid);
    } else {
        for (i = 0; i < T_loopcnt; i++) {
            temp = cool(i);
            adjust(g, temp, pp);
        }
    }
 
    if (ctr.x != 0.0 || ctr.y != 0.0) {
        for (n = agfstnode(g); n; n = agnxtnode(g, n)) {
            ND_pos(n)[0] += ctr.x;
            ND_pos(n)[1] += ctr.y;
        }
    }
    if (reset)
        reset_params();
}